Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIDRKDTNRFKLVSKYSPSGDQPQAIETLVDNIEGGEKAQILKGATGTGKTYTMSQVIAQVN-KPTLVIAHNKTLAGQLYGEFKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSVNDEIDKLRHSATSSLLERNDVIVVASVS-CIYGLGSPKEYADSVVSLRPGQEISRDQLLNNLVDIQFERNDIDFQRGKFRVRGDVVEVFPASRDEHAFRIEFFGDEIDRIREIESLTGRVLGEVEHLAIFPATHFMTNDEHMEEAISKIQAEMENQVELFEKEGKLIEAQRIRQRTEYDIEMLREMGYTNGVENYSRHMDGRSEGEPPFTLLDFFPEDFLIMIDESHMTMGQIKGMYNGDRSRKEMLVN-YGFRLPSALDNRPLRREEFESH--VHQIVYVS--ATPGDYEMEQTDTVVEQIIRPTGLLDPEVEV-RPSMGQMDDLLGEINLRTEKGERTFITTLTKRMAEDLTDYLKEMGVKVKYMHSDIKTLERTEIIRDLRLGVFDVLIGINLLREGIDVPEVSLVAILDADKEGFLRNERGLIQTIGRAARNSNGHVIMYADKITDSMQRAMDETARRRRLQMDYNEKHGIVPQTIKKEIRDLIAITKSNDSDKPEKVVDYSSLSKKERQAEIKALQQQMQEAAELLDFELAAQIRDVILELKAID |
3HJH Chain:A ((14-450)) | ------------------------------------GEQRLLGELTGAACATLVAEIAER-HAGPVVLIAPDMQNALRLHDEISQFTD-QMVM-------------NLADWETLPYDSFSPHQDIISSRLSTLYQLPTMQRGVLIVPVNTLMQRVCPHSFLHGHALVMKKGQRLSRDALRTQLDSAGYRHVDQVMEHGEYATRGALLDLFPMGS-ELPYRLDFFDDEIDSLRVFDVDSQRTLEEVEAINLLPAHEFPTDKAAIELFRSQWRDTFEVKRD-----------------PEHIYQQVSKGTLPAGIEYWQPLFFSEP----LPPLFSYFPANTL-L-VNTGDLETSAERFQADTLARFENRGVDPMR-PLLPPQSLWLRVDELFSELKNWPRVQLKTEHLPTKA-AN-----ANLGFQKL----PDLAVQAQQKAPLDALRKFLETF---DGPVVFSVESEGRREALGELLARIKIAPQRIMRL----------DEASDRG--RYLMIGAAEHGFVDTVRNLALICESDLL------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HJH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128467 for 3383 contacts (-38.0/contact) +
2D Compatibility (PS) -45998 + (NN) -10556 + (LL) 17832
1D Compatibility (HY) -10800 + (ID) 3950
Total energy: -181939.0 ( -53.78 by residue)
QMean score : 0.358
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