Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MTFAKRLRELRQLNNITQIEMANKLGLNRVTYTNY-EREKSEPSISTLKEIATIFNVSIDYLIDFEDDTKGKNNRKKLLLSLEAELKKINRSFELEIKSLLIDLLNLIKTNQLSSCDVTKWLIDINEKDLECSSEILRFISEMPKEFEPIIDIIEIYQALNKNDE
3OP9 Chain:A ((6-114))
IQHQFAENLSRLKKEHGLKNHQIAELLNVQTRTVAYYMS-GETKPDIEKLIRLATYFHLSIDELVGYVQEVWNDLSLKQWLLSLNLRSEEEIAKIKILVDTVETLYPN-----------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3OP9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24897 for 578 contacts (-43.1/contact) +
2D Compatibility (PS) -11122 + (NN) -4274 + (LL) 4840
1D Compatibility (HY) -7200 + (ID) 1200
Total energy: -43853.0 ( -75.87 by residue)
QMean score : 0.592
(partial model without unconserved sides chains):
PDB file :
Tito_3OP9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OP9-query.scw
PDB file :
Tito_Scwrl_3OP9.pdb
: