Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKKETRHQLIRSLVSETKVRTQHELRELLEKNGVSVTQATLSRDMKELNLIKVNESSDNATETYYEIHSISQKRWEERLRFYMEDALVMLFPVQNQIVLKTLPGLAQSFGSILDSILLPEILATVCGDDTCLIICNNSEEAQKCFEKLSQYTPPFFFSKK
2P5M Chain:A ((8-83))
-----------------------------------------------------------------------------SKLKRALMDAFVKIDSASHMIVLKTMPGNAQAIGALMDNLDWDEMMGTICGDDTILIICRTPEDTEGVKNRLLELL--------
General information:
TITO was launched using:
RESULT:
Template:
2P5M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71780 for 556 contacts (-129.1/contact) +
2D Compatibility (PS) -8425 + (NN) -3568 + (LL) 6560
1D Compatibility (HY) -7200 + (ID) 1400
Total energy: -85813.0 ( -154.34 by residue)
QMean score : 0.564
(partial model without unconserved sides chains):
PDB file :
Tito_2P5M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2P5M-query.scw
PDB file :
Tito_Scwrl_2P5M.pdb
: