Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDKVYVEGMEFYGYHGVFTEENKLGQRFKVDLTAELDLSKAGQTDDLEQTINYAELYHVCKDIVEGEPVKLVETLAERIAGTVLGKFQPVQQCTVKVIKPDPPIPGHYKSVAIEITRKKS |
5F3M Chain:A ((4-123)) | MDKIYIHDMEFYGYHGVFPEENKLGQRFKVDLTVELDLKRAGESDDLEHSVNYGELFELCRKVVEDRTYKLVESIAENIATDILKQYESISRCTIKVIKPDPPIPGHYRAVAVEITRERP |
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General information:
TITO was launched using:
| RESULT:
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Template: 5F3M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 11476 for 812 contacts (14.1/contact) +
2D Compatibility (PS) -12833 + (NN) -7776 + (LL) 0
1D Compatibility (HY) 5200 + (ID) 400
Total energy: -4333.0 ( -5.34 by residue)
QMean score : 0.162
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