Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKTKSKFICQSCGYESPKWMGKCPGCGAWNTMVEEMIKKAPANRRAAFSHSVQTVQKPSPITSIETSEEPRVKTQLGEFNRVLGGGVVKGSLVLIGGDPGIGKSTLLLQVSAQLSG------SSNSVLYISGEE--SVKQTKLRADRLGINN----PSLHVLSETDME---YISSA----IQ--EMNPSFVVVDSIQTVYQSDITSA---PGSVSQVRECTAELMKIAKTKGIPIFIVGHVTKEGS-IAGPRLLEHMVDTVLYFEGERHHTFRILRAVKNRFGSTNEMGIFEMREEGLTEVLNPSEIFLEERSAGSAGSSITASMEGTRPILVEIQALISPTSFGNPRRMATGIDHNRVSLLMAVLEKRVGLLLQNQDAYLKVAGGVKLDEPAIDLAIVISIASSFRDTPPNPADCFIGEVGLTGEVRRVSRIEQRVKEAAKLGFKRMIIPAANLDGWTKPKGIEVIGVANVAEALRTSLGG |
| 4HYY Chain:A ((96-338)) | -------------------------------------------------------------------KMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLRDIADRFNVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMT----KPIGGHILAHASTTRISLRKGR-GELRIAKIYDSPEMPEN-EATFAITAGGIGDA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HYY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120112 for 1621 contacts (-74.1/contact) +
2D Compatibility (PS) -21920 + (NN) -8553 + (LL) 16092
1D Compatibility (HY) -6800 + (ID) 1800
Total energy: -143093.0 ( -88.27 by residue)
QMean score : 0.478
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