Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSYDVVIPAAGQGKRMKAGRNKLFIELKGDPVIIHTLRVFDSHRQ-CDKIILVINEQEREHFQQLLSDYPFQTSIELVA-GGDERQHSVYKGLKAVKQEKIVLVHDGARPFIKHEQIDELIAEAEQT-GAAILAVPVKDTIKRVQ-DLQVSETIERSSLWAVQTPQAFRLSLLMKAHAEAERKGFLGTDDASLVEQMEGGSVRVVEGSYTNIKLTTPDDLTSAEAIMESESGNKHV
2XWL Chain:A ((2-221))
-ATVAVVPAAGSGERLRAGRPKAFVTLGGTPLLEHALSGLRAS-GVIDRIVIAVPPALTDESKLV---FGGE--DSVIVSGGVDRTESVALALEAAGDAEFVLVHDAARALTPPALIARVVAALKEGHSAVVPGLAPADTIKAVDANGAVLGTPERAGLRAVQTPQGFHADVLRRAYARATA--GGVTDDASLVEQLG-TPVQIVDGDPLAFKITTPLDLVLAEAVLAHH------
General information:
TITO was launched using:
RESULT:
Template:
2XWL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111741 for 1784 contacts (-62.6/contact) +
2D Compatibility (PS) -23407 + (NN) -9621 + (LL) 144
1D Compatibility (HY) -11200 + (ID) 3900
Total energy: -159725.0 ( -89.53 by residue)
QMean score : 0.468
(partial model without unconserved sides chains):
PDB file :
Tito_2XWL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XWL-query.scw
PDB file :
Tito_Scwrl_2XWL.pdb
: