Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNQNQLISVEDIVFR---YRKDAERRALDGVSLQVYEGEWLAIVGHNGSGKSTLARALNGLILPESGDIEVAGIQLTEESVWEVRKKIGMVFQNPDNQFVGTTVRDDVAFGLENNGVPREEMIERVDWAVKQVNMQDFLDQEP-----------HHLSGGQKQRVAIAGVIAARPDIIILDEATSMLDPIGREEVLETVRHLKEQGMATVISITHDLNEAAKADRIIVMNGGKKYAEGPPEEIFKLNKELVRIGLDLPFSFQLSQLLRENGLALEENHLTQEGLVKELWTLQSKM |
| 4S0F Chain:A ((488-713)) | ----------DIEFRNVDFRYGLRKPVLKNINLTIPKGKTVAIVGESGSGKTTLAKLLMNFYSPEKGDILINGHSIKNISLELIRKKIAFVSQ--DVFIFSGTVKENLCLGNEN--VDMDEIIK----AAKMANAHDFIEKLPLKYDTFLNESGANLSEGQKQRLAIARALLKKPDILILDQATSNLDSITENHIKDAIYGLEDD--VTVIIIAHRLSTIVNCDKIYLLKDGEIVESGSHTELIAL------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4S0F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76627 for 1637 contacts (-46.8/contact) +
2D Compatibility (PS) -23319 + (NN) -9546 + (LL) 4932
1D Compatibility (HY) -17200 + (ID) 4150
Total energy: -125910.0 ( -76.92 by residue)
QMean score : 0.446
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