Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFKIKKKKLFIPIIILVLTAFLALIGYISIIFLGHYVIDEKKLILHASSKIVDQNGDEVASLY-TENREPVSINEIPKQV-REAFIAVEDKRFYEHHGIDAKSVGRAVYRDILAGGKVEGGSTITQQLAKNIFLTHDKTFLRKTKEVIIAINLERDYSKDKLLEMYLNQLYFGHGVYGIQAASHYYFNKEVKDLTVSEGAVLAAIPKAPSTYSPILHPDKNKERRDTILGM-MNDQGYISAKEAVTAQGRTLGLHVKKQSETPW----------FDSYIDLVIKEA-EDKYSI--SGEQLLQGGYTIKVPL-DSKLQKTAYQVMKEGSYYPGTDQNAEGSAVFINNKTGGVEAAIGGRDYT-SKGYNRVTAVRQPGSTFKPLAVYGPAMQEK-KFKPYSLLKDELQSY-GDYTPKNYDSRYEGEVTMSDAITYSKNAPAVWTLNEIGVETG----KSYLKANGIDIPDE-GLALALGGLEKGVSPLQLAGAFHTFAANGTYTEPFFISSIIDEDGETIADHKEEGKRVF-SKQTSWN-MTR-MLQQVVKKGTATSGTYHGDL-AGKTGSTSYTGVSGA--------TKDAWFAGYTPKITG-AVW-MGYDKTDQ---NHYLKAGSSYPTRLFKDI-LTQAGETGHVFTKPKNVKELESPIELKPVKTLTADYTFKAAGLFTIELKWDAQEDDRAVYRIYVNKDGEETLLDSVEGKGSYEIPYANLFSGASYKIVPYNTQTKREGEGTDYVQPKLFSS
2OLU Chain:A ((10-634))-----------------------------------------KLQDPIPAKIYDKNGELVKTLDNGQRHEHVNLKDVPK-SMKDAVLATEDNRFYEHGALDYGFG-------------SEGASTLTQQVVKDAFLSIG----RKAQEAYLSYRLEQEYSKDDIFQVYLNKIYYSDGVTGIKAAAKYYFNKDLKDLNLAEEAYLAGLPQVPNNYNIYDHPKAAEDRKNTVLYLMH-YHKRITDKQWEDAKKIDLKANLVNRTPEERQNIDTNQDSEYNSYVNFVKSELMNNKAFKDENLGNVLQSGIKIYT-NMDKDVQKTLQNDVDNGSFYK--NKDQQVGATILDSKTGGLVAISGGRDFKDVVNRNQATDPHPTGSSLKPFLAYGPAIE-NMKWATNHAIQDESSYQVDGSTFRNYDTKSHGTVSIYDALRQSFNIPALKAWQSVKQNAGNDAPKKFAAKLGLNYEGDIGPSEVLGGSASEFSPTQLASAFAAIANGGTYNNAHSIQKVVTRDGETIEYDHT--SHKAMSDYTAY-MLAEMLKGTFKPYGSAYGHGVSGVNMGAKTGTGTYGAETYSQYNLPDNAAKDVWINGFTPQ-YTMSVWMGFSKVKQYGENSFVGHSQQEYPQFLYENVMSKISSRDGEDFKRPSS--------------------------------------------------------------------------------VSGSIPSINVSGSQDNNTTNRSTH-


General information:
TITO was launched using:
RESULT:

Template: 2OLU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 3011 -74593 -24.77 -132.02
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -24.77
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.380

(partial model without unconserved sides chains):
PDB file : Tito_2OLU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2OLU-query.scw
PDB file : Tito_Scwrl_2OLU.pdb: