Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAVKKVVTHPAEVLETPAETVTVFDKKLKKLLDDMYDTMLEMDGVGLAAPQIGILKRAAVVEI-GDDRGRIDLVNPEILEKSGEQTGIE-GCLSFPNVYGDVTRADYVKVRAFNRQGKPFILEARGFLARAVQHEMDHLDGVLFTSKISKYYTEDELADMEG
4WXL Chain:B ((5-148))----NVLIYPDDHLKVVCEPVTEVNDAIRKIVDDMFDTMYQEKGIGLAAPQVDILQRIITIDVEGDKQNQFVLINPEILASEGE-TGIEEGCLSIPGFRALVPRKEKVTVRALDRDGKEFTLDADGLLAICIQHEIDHLNGILFVDYLS-------------


General information:
TITO was launched using:
RESULT:

Template: 4WXL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 703 -78141 -111.15 -550.29
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain B : 0.83

3D Compatibility (PKB) : -111.15
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.521

(partial model without unconserved sides chains):
PDB file : Tito_4WXL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4WXL-query.scw
PDB file : Tito_Scwrl_4WXL.pdb: