Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHRGKGMKFVGDSRIPAEKKPNIPKDYSEYPGKTEAFWPNFLLKEWMVGAVFLIGFLVLTIVHQPPLERMADPTDTGYIPLPDWYFLFLYQLLKYEYAAGSFTVVGAMIMPGLAFGALLLAPFLDRGTERRPWKRPVAVGMMLLAISAAVFLTWQSVATHDWAKAEEQGKITKEADIDTNAEGYKVFKEQGCISCHGDNLQ---------------------------GGAAGPSLVD--SGLKPDEIKKIAVEGKG-----KMPAGVF------------------------------------KGNDKQLEELAKFISETTAK
3MK7 Chain:B ((49-197))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YTALQLEGRDLYIREGCVGCHSQMIRPFRAETERYGHYSVAGESVYDHPFLWGSKRTGPDLARVGGRYSDDWHRAHLYNPRNVVPESKMPSYPWLVENTLDGKDTAKKMSALRMLGVPYTEEDIAGARDSVNGKTEMDAMVAYLQVLGT-


General information:
TITO was launched using:
RESULT:

Template: 3MK7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 206 2044 9.92 25.87
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain B : 0.52

3D Compatibility (PKB) : 9.92
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.52
QMean score : 0.607

(partial model without unconserved sides chains):
PDB file : Tito_3MK7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3MK7-query.scw
PDB file : Tito_Scwrl_3MK7.pdb: