Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGKKMTIASLILMTAGLTACGANDNAMNDTRNNGNTRPIGYYTNENDADRQGDGIDHDGPVSELMEDQNDGNRNTTNVNNRDRVTADDRVPLATDGTYNNTNNRNMNRNAANNGYDNQENRRLAAKIANRVKQVKNVNDTQVMVSDDRVVIAVKSHREFTKSDRDNVVKAARNYANGRDVQVSTDKGLFRKLHKMNNR
2L3M Chain:A ((18-51))-------------------------------------------------------------------------------------------------------------------------HCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDS-------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2L3M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 78 -14019 -179.72 -412.31
target 2D structure prediction score : 0.79
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -179.72
2D Compatibility (Sec. Struct. Predict.) : 0.79
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.789

(partial model without unconserved sides chains):
PDB file : Tito_2L3M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2L3M-query.scw
PDB file : Tito_Scwrl_2L3M.pdb: