Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIMKMTHLNMKDFNKPNEPFVVFGRMIPAFENGVWTYTEERFSKPYFKQYEDDDMDVSYVEEEGKAAFLYYLENNCIGRI--KIRSNWNGYALIE-DIAVAKDYRKKGVGTA-LLHKAIEWAKENHFCGLMLETQDINISACHFYAKHHFIIGAVDTMLYSNFPTANEIAIFWYYKF
2PSW Chain:A ((2-156))---------------SKGSRIELGDVTPHNIKQLKRLNQVIFPVSYNDKFYKDVL------EVGELAKLAYFNDIAVGAVCCRVDHSQNQKRLYIMTLGCLAPYRRLGIGTKMLNHVLNICEKDGTFDNIYLHVQISNESAIDFYRKFGFEIIETKKNYYKRIEPADAHVLQKNLK-


General information:
TITO was launched using:
RESULT:

Template: 2PSW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 659 -55511 -84.24 -367.62
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -84.24
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.228

(partial model without unconserved sides chains):
PDB file : Tito_2PSW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PSW-query.scw
PDB file : Tito_Scwrl_2PSW.pdb: