Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVNKSRMMPAVLAVAVVVAFLTTGCIRWSTQSRPVVNGPAAAEFAVALRNRVSTDAMMAHLSKLQDIANANDGTRAVGTPGYQASVDYVVNTLRNSGFD-VQTPEFSARVFKAEKG---VVTLGG---N-------------TVEARALEYSLGTPPDGVTGPLVAAPADDSPGCSPSDYD------RLPVSGAVVLVDRGVCPFAQKEDAAAQRGAVALIIADNIDEQ------------------AMGGTL------G--------------------ANTDVKIPVVSVTKSVGFQLRGQ-SG----------------------------PTTVKLTASTQSFKARNVIAQTKTG-SSANVVMAGAHLDSVPEGPGINDNGSGVAAVLETAVQLGNSP----HVSNAVRFAFWGAEEFGLIGSRNYVESLDIDALKGIALYLNFDMLASPNPGYFTYDGDQSLPLDARGQPVVPEGSAGIERTFVAYLKMAGK-------------------------TAQDTSFDGRSDYDGFTL-AGIPSGGLFSGAEVKKSAEQAELWGGTADEPFDPNYHQKTDTLDHIDR------TALGINGAGVAYAVGLYAQDLGGPNGVPVMADRTRHLIAKP |
3FED Chain:A ((13-548)) | ------------------------------------------SIRWKLVSEMKAENIKSFLRSFTK------LPHLAGTEQNFLLAKKIQTQWKKFGLDSAKLVHYDVLLSYPNETNANYISIVDEHETEIFKTSPPPDGYENVTNIVPPYNAFSAQGMPEGDLVYV----NYA-RTEDFFKLEREMGINCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSDPADYFAPEVQPYPKGWNLPGTAAQRGNVLNLNGAGDPLTPGYPAKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLGGIAPPDKSWKGALNVSYSIGPGFTGSSFRKVRMHVYNINKITRIYNVVGTIRGSVEPDRYVILGGHRDSWV--FGAIDPTSGVAVLQEIARSFGKLMSKGWRPRRTIIFASWDAEEFGLLGSTEWAEENVKILQERSIAYINSDSSIEGNYT-LRVDC-----------------TPLLYQLVYKLTKEIPSPDDGFESKSLYESWLEKDPSPENKNLPRINKLGSGSDFEAYFQRLGIASGRARYTKNKKT-------D----KYSSYPVYHTIYETFELVEKFYDPTFKKQLSVAQLRGALVYELVDSK-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FED.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154662 for 3482 contacts (-44.4/contact) +
2D Compatibility (PS) -41491 + (NN) -9663 + (LL) 5412
1D Compatibility (HY) -8000 + (ID) 3700
Total energy: -212104.0 ( -60.91 by residue)
QMean score : 0.438
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