Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRTPATVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTVLSAQI-GPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAGDYLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREGVHTLPMLYALRESGPDCARLRA-LLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYAAQARHELALLPDVPGRRALAALVDYTVSRHG
3LMD Chain:A ((29-350))------------FGDPELTARINDAMVQVEELLHTELSSGEDFLVDIVMHLTRAGGKRFRPMFALLASEFGEKP-LSENVIKAAVVVEITHLATLYHDDVMD-----------NARWDNSVAILAGDILLAHASGLMSQLGTDTVAHFAETFGELVTGQMRETVGPRD-TDPIEHYTNVIREKTGVLIASAGYLGAMHAGAAPEHIDALKNFGAAVGMIFQIVDDIIDIFS--------PGTDLREGVFTLPVLYALREDTPVGAELRDILTGPLE-DDETVNHVLELLSQSGGRQAALDEVYRYMDIANAELDRLPDSTVKEALRNLATFTVKRVG


General information:
TITO was launched using:
RESULT:

Template: 3LMD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -141351 for 2425 contacts (-58.3/contact) +
2D Compatibility (PS) -33269 + (NN) -23015 + (LL) 1444
1D Compatibility (HY) -26000 + (ID) 7500
Total energy: -229691.0 ( -94.72 by residue)
QMean score : 0.636

(partial model without unconserved sides chains):
PDB file : Tito_3LMD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3LMD-query.scw
PDB file : Tito_Scwrl_3LMD.pdb: