Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDV----VEEICAPANHWSVRTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYT--SGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRDYSARHRSYGR
5HC8 Chain:A ((13-243))-------------------------------PNHVAIIIDGHRKWAKSRGVT-VQEGHQTGVNNWKHIISRASQLGIKLLTIWALSPQNFNRSKMEVDFLMRIYEDFLRSDVKELVTSQQDIQFSAIGDKSRLPEYLQDAISYAEGLSQANKGMHFILAVAYGGREDIVEAARKIAAK-VEHGILRPDDIDEATFE---QHLMTNITKFPSPDLLIRAAGEQRLSNFFLWQLPFTEFYFTPKLFPDFGEADLLDALASYRCRYRGFG-


General information:
TITO was launched using:
RESULT:

Template: 5HC8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -135478 for 1778 contacts (-76.2/contact) +
2D Compatibility (PS) -24915 + (NN) -13315 + (LL) 2688
1D Compatibility (HY) -18800 + (ID) 3900
Total energy: -193720.0 ( -108.95 by residue)
QMean score : 0.572

(partial model without unconserved sides chains):
PDB file : Tito_5HC8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5HC8-query.scw
PDB file : Tito_Scwrl_5HC8.pdb: