Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRRMGDASLTTELGRVLVTGGAGFVGANLVTTLLDRGHWVRSFDRAPSLLPA---HPQLEVLQGDITDADVCAAAVD--GIDTIFHTAAIIELMGGASVTDEYRQRSFAVNVGGTENLLHAGQRA--GVQRFVYTSSNSVVMGGQNIAGGDETLPYTDRFNDLYTETKVVAERFVLAQNGVDGMLTCAIRPSGIWGNGDQT--MFRKLFESVLKGHVKVLVGRKSARLDNSYVHNLIHGFILAAAHLVPDGTAPGQAYFINDAEPINMFEFARPVLEACGQRWPKMRISGPAVRWVMTGWQRLHFRFGFPAPLLEPLAVERLYLDNYFSIAKARRDLGYEPLFTTQQALTECLPYYVSLFEQMKNEARAEKTAATVKP |
| 4LW8 Chain:A ((15-322)) | ----------GRPSRRAFVTGLTGFTGRYMAERLQAAGYDVWGTVAPGTPRPADPAFAQCTLLPVDLLDAEAMRAAAADARPDAVVHLAARA-----------EPSQTYAVNIVGTRNLLAALSGLDRRPSAVLLASSANIYGNSTA-GVLDETVAPA--PANDYAVSKLAMEYAAKLWAD--RLPIVIARPFNYTGVGQSDAYLLPKLVAHYARNAPRISLGNLDVSRDFSDVRDVTAAYLKLIEA-----APAGETFNVCSERAYSLKEVLAMLSRIAGYVIDV--TIDP--R------------------FVR----HNEVKSLSGSRDKLRRAVGELPVTPLDETLRWMVDAMRAA------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LW8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161910 for 2447 contacts (-66.2/contact) +
2D Compatibility (PS) -31615 + (NN) -13365 + (LL) 5644
1D Compatibility (HY) -2800 + (ID) 3100
Total energy: -207146.0 ( -84.65 by residue)
QMean score : 0.435
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