Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRSADLTAHARIREAAIEQFGRHGFG-VGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDFVAEEIRSSKAAALK---SNDPTTWL----AQMAEIESYAPLMAYLVRSMQSGG-EL----AKMLWQKMIDNAEEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDMVLPSLEVYTEGLLADRAMYEAFLAEAQQGEAHVG
2QTQ Chain:A ((14-212))
----TPGARDLLLQTASNIMREGDVVDISLSELSLRSGLNSALVKYYFGNKAGLLKALLDRDMENIVKSVDALLAKDDMSPEAKLRRHISKCIDTYYDYPYLNRLLMRLVRDSDEAEAKRIADQYLLPLHRAYNRFIGEGVKAGVFRP-INPQLFYFTVTGAADRFFSARLVLKHCFDQ-DTLTEQLRDSYREHTVDFIMAGILA--------------------
General information:
TITO was launched using:
RESULT:
Template:
2QTQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73320 for 1308 contacts (-56.1/contact) +
2D Compatibility (PS) -20669 + (NN) -10652 + (LL) 2368
1D Compatibility (HY) -9200 + (ID) 1850
Total energy: -113323.0 ( -86.64 by residue)
QMean score : 0.429
(partial model without unconserved sides chains):
PDB file :
Tito_2QTQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QTQ-query.scw
PDB file :
Tito_Scwrl_2QTQ.pdb
: