Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVANLKDLLAEGVSGRGVLVRSDLNVPLDEDGTITDAGRIIASAPTLKALLDADAKVVVAAHLGRPKDGPDPTLSLAPVAVALGEQLGRHVQLAGDVVGADALARAEGLTGGDILLLENIRFDKRETSKN---DDDRRALAKQLVELVGTGGVFVSDGFGVVHRKQASVYDIATLLPHYAGTLVADEMRVLEQLTSSTQRPYAVVLGGSKVSDKLGVIESL--ATKADSIVIGGGMCFTFLAAQGFSVGTSLLED-------DMIEVCRGLLETYHDVLRLPVDLVVTEKFAADSPPQTVDVGAVP--NGLMG----LDIGPGSIKRFSTLLSNAGTIFWNGPMGVFEFPAYAAGTRGVAEAIVAATGKGAFSVVGGGDSAAAVRAMNIPEGAFSHISTGGGASLEYLEGKTLPGIEVLSREQPTGGVL |
2CUN Chain:B ((8-399)) | ------------NFHNKTVFLRVDLNSPM-KDGKIISDARFKAVLPTIRYLIESGAKVVIGTHQGKPY-SEDYTTT-EEHARVLSELLDQHVEYIEDIFGRYAREKIKELKSGEVAILENLRFSAEEVKNKPIEECEKTFLVKKLSKVID---YVVNDAFATAHRSQPSLVGFARIKPMIMGFLMEKEIEALMRAYYSKDSPKIYVLGGAKVEDSLKVVENVLRRERADLVLTGGLVANVFTLAKGFDLGRKNVEFMKKKGLLDYVKHAEEILDEFYPYIRTPVD------FAVDYKGERVEIDLLSENRGLLHQYQIMDIGKRTAEKYREILMKARIIVANGPMGVFEREEFAIGTVEVFKAIADSP---AFSVLGGGHSIASIQKYGIT--GITHISTGGGAMLSFFAGEELPVLRALQ--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CUN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -256578 for 3388 contacts (-75.7/contact) +
2D Compatibility (PS) -40238 + (NN) -15613 + (LL) 1624
1D Compatibility (HY) -28400 + (ID) 6650
Total energy: -345855.0 ( -102.08 by residue)
QMean score : 0.593
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