Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATSKVERLVNLVIALLSTRGYITAEKIRSSVAGYSDSPSVEAFSRMFERDKNELRDLGIPLEVGRVSALEPTEGYRIN-RDAYALSPVELTPDEAAAVAVATQLWESPELITATQGALLKLRAAGVDVDPLDTGAPVAIASAAAVSGLRGSEDVLGILLSAIDSGQVVQFSHRSSRAEPYTVRTVEPWGVVTEKGRWYLVGHDRDRDATRVFRLSRIGAQVTPIGPAGATTVPAG--VDLRSIVAQKVTEVPTGEQATVWVAEGRATALRRAGRSAGPRQLGGRDGEVIE-LEIRSSDRLARE------ITGYGADAIVLQPGSLRDDVLARLRAQAGALA--- |
| 3SHS Chain:A ((2-304)) | AFTVSIQS---------NKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENNTATLTVADATSENA-GSYKVTVQDTDTMTSVESEVFLMEEAELIVNITEPQHFYVSSQTD-VELHATVKF----SGGKTPADNYELHYSWSKG-EDVID------TTQDITIQEFTADKNGVYTVKVW---------------GESEDSAASASTKIMLATMNVDQ-DVVESKTVALGNEISLNYVVSEDIVGDSSGMP---NLTIKYNWYLQREGQL-SPTLIGSEVGEALEGFSITPDGHLFKESATYDDTAKFWCVAKLYQQIEDETVEVAASTSRKCSMEVVK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SHS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5391 for 2060 contacts (-2.6/contact) +
2D Compatibility (PS) -29784 + (NN) -4439 + (LL) 4416
1D Compatibility (HY) -5600 + (ID) 2450
Total energy: -43248.0 ( -20.99 by residue)
QMean score : 0.105
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