Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------------------------------------------------------------------------MTTARDIMNAGVTCVGEHETLTAAAQYMRE-----HDIGALPICGDDDRLHGMLTDRDIVIKGLAAGLDPNTATAGELARDSIYYVDANASIQEMLNVMEEHQVRRVPVI-SEHRLVGIVTEADIARHLPEHAIVQFVKAICSPMALAS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 2YVX Chain:A ((30-471)) | VSLQEALQEGDTRALREVLEEIHPQDLLALWDELKGEHRYVVLTLLPKAKAAEVLSHLSPEEQAEYLKTLPPWRLREILEELSLDDLADALQAVRKEDPAYFQRLKDLLDPRTRAEVEALARYEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLI-------VADPRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEAEATEDIHKLGAVDVPDLVYSEAGPVALWLARVRWLVILILTGMVTSSILQGFESVLEAVTALAFYVPVLLGTGGNTGNQSATLIIRALATRDLDLRDWRRVFLKEMGVGLLLGLTLSFLLVGKVYWDGHPLLLPVVGVSLVLIVFFANLVGAMLPFLLRRLGVDPALVSNPLVATLSDVTGLLIYLSVARLLLE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2YVX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -86186 for 950 contacts (-90.7/contact) +
2D Compatibility (PS) -14637 + (NN) -5448 + (LL) 388
1D Compatibility (HY) -10800 + (ID) 1600
Total energy: -118283.0 ( -124.51 by residue)
QMean score : 0.374
|
|
|