Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTTLAIVRLDPGLPLPSRAHDGDAGVDLYSAEDVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVNSPGTIDAGYRGEIKVALINLDPAAPIVVHRGDRIAQLLVQRVELVELVEVSSFDEAGLASTSRGDGGHGSSGGHASL
3ARA Chain:A ((26-148))
----LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPRSGLAAKHFIDV--GAGVIDEDYRGNVGVVLFNFG-KEKFEVKKGDRIAQLICERIFYPEIEEVQAL------------------------
General information:
TITO was launched using:
RESULT:
Template:
3ARA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83427 for 827 contacts (-100.9/contact) +
2D Compatibility (PS) -13555 + (NN) -8169 + (LL) -112
1D Compatibility (HY) -11200 + (ID) 2450
Total energy: -118913.0 ( -143.79 by residue)
QMean score : 0.500
(partial model without unconserved sides chains):
PDB file :
Tito_3ARA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ARA-query.scw
PDB file :
Tito_Scwrl_3ARA.pdb
: