Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTSLDLTGRTAIITGASRGIGLAIAQQLAAAGAHVVLTARRQEAADEAAAQVGDRALGVGAHAVDEDAARRCVDLTLERFGSVDILINNAGTNPAYGPLLEQDHARFAKIFDVNLWAPLMWTSLVVTAWMGEHGGAVVNTASIGGMHQSPAMGMYNATKAALIHVTKQLALELSPR-IRVNAICPGVVRTRLAEALWKDHEDPLAATIALGRIGEPADIASAVAFLVSDAASWITGETMIIDGGLLLGNALGFRAAPSTEH
5END Chain:B ((5-246))
---MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNA------------KEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVV--------ANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGGMY---------------
General information:
TITO was launched using:
RESULT:
Template:
5END.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -181828 for 1852 contacts (-98.2/contact) +
2D Compatibility (PS) -24307 + (NN) -6638 + (LL) 1400
1D Compatibility (HY) -15200 + (ID) 4050
Total energy: -230623.0 ( -124.53 by residue)
QMean score : 0.636
(partial model without unconserved sides chains):
PDB file :
Tito_5END.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5END-query.scw
PDB file :
Tito_Scwrl_5END.pdb
: