Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVLGFWDIAVPIVGAPMAGGPSTPALAAAVSNAGGLGFVAGGY-LSADRLADDIAAARAATTGPIGANLFVPQPSVADWAQLEYYADELEEVAEYYHTEVGQPVYGDDDDWVRKLEVVADVRPEVVSFTFGAPPPDVVQRLSALGLLVSITVTSVYEAGVAIAAGADSLVVQGPAAGGHRGTFAPDMEPGTESLHQLLDRIGSAHDVPLVAAGGLGTAEDVAAVLRRGAIAAQVGTALLLADEAGTNAAHRAALKNPEFDATLVTRAFSGRYARGLANNFTRLLDHVAP---LGYPEVHQMT--KPIRAAAVQADDPHGTNLWAGSAHRKTRPG-PAADIIASLTPDVCSA |
| 2GJL Chain:A ((8-316)) | -FTETFGVEHPIMQGGMQW-VGRAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQKP-------------------------------VPYAEYRAAIIEAGIRVVETAGNDP-GEHIAEFRRHGVKVIHKCTAVRHALKAERLGVDAVSIDGFECAGHPGED-------DIPGLVLLPAAANRLRVPIIASGGFADGRGLVAALALGADAINMGTRFLATRECPIHPAVKAAIRAADERSTDLIMRSLRNTARVARNAISQEVLAIEARGGAGYADIAALVSGQRGRQV-YQQGDTDLGIWSAGMVQGLIDDEPACAELLRDIVEQARQL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GJL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171096 for 2720 contacts (-62.9/contact) +
2D Compatibility (PS) -33412 + (NN) -20052 + (LL) 2116
1D Compatibility (HY) -4800 + (ID) 3450
Total energy: -230694.0 ( -84.81 by residue)
QMean score : 0.506
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