Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTARPLSELVERGWAAALEPVADQVAHMGQFLRAEIAAGRRYLPAGSNVLRAFTFPFDNVRVLIVGQDPYPTPGHAVGLSFSVAPDVRPWPRSLANIFDEYTADLGYP---LPSNGDLTPWAQRGVLLLNRVLTVRPSNPASHRGKGWEAVTECAIRALAARAAPLVAILWGRDASTLKPMLAAGNCVAIESPHPSPLSASRGFFGSRPFSRANELLVGMGAEPIDWRLP
2C53 Chain:A ((78-242))
---------------------------------------------------------DEVRVVIIGQNPYHHPGQAHGLAFSVRANVPP-PPSLRNVLAAVKN--CYPEARMSGHGCLEKWARDGVLLLNTTLTVKRGAAASHSRIGWDRFVGGVIRRLAARRPGLVFMLWGTHAQNAIRPDPRVHCV-LKFSNPSPLSKV-PFGTCQHFLVANRYLETRSISPIDW---
General information:
TITO was launched using:
RESULT:
Template:
2C53.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75932 for 1236 contacts (-61.4/contact) +
2D Compatibility (PS) -17948 + (NN) -11862 + (LL) 5384
1D Compatibility (HY) -13600 + (ID) 3550
Total energy: -117508.0 ( -95.07 by residue)
QMean score : 0.480
(partial model without unconserved sides chains):
PDB file :
Tito_2C53.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2C53-query.scw
PDB file :
Tito_Scwrl_2C53.pdb
: