Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTVVGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYVTDWAGPSALIKSIGLRLGVPWYAYD---TVTFSGEVTAVN----DGLITVKVV-GRNTLGDHVTATVELSMRDS |
| 4V12 Chain:A ((7-343)) | DTSTLESRVGHYYQMEDTYLVGREKVREFARAVQDYHPAHWNLATAADLGHPGLIAPLTFTSAPAMACNQRMFESVVVGYDMYLQTEEVFEQHRPIVEGDELSIDIELTSVRRIAGRDLITVTNTFTDTAGEVVHTLHTTVVGITAEDVDPAIRPAVQGVMMHGINMLGVEETNAPYEKTVRPEGELRIAQGGATRTPTSLNFDDLKVGEELPVHTARLSRGDLVNYAGVAGDANPLHWDENIAKLAGQPDVIAHGMLTMGLGAGFVSSWSGDPGAITRYAVRLSQPAVVPAEGTEIEYSGRIKSLDPETRTGVVIVAAKSGGRKIFGLATATIRFS---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4V12.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75568 for 917 contacts (-82.4/contact) +
2D Compatibility (PS) -13315 + (NN) 2135 + (LL) 204
1D Compatibility (HY) -2800 + (ID) 1500
Total energy: -90844.0 ( -99.07 by residue)
QMean score : 0.336
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