Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSPAPVQVMGVLNVTDDSFSDGGCYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ-GITVSIDTMRADVARAALQNGAQMVNDVSGGRADPAMGPLLAEADVPWVLMHWRAVSADTPHVPVRYGNVVAEVRADLLASVADAVAAGVDPARLVLDPGLGFAKTAQHNWAILHALPELVATGIPVLVGASRKRFLGALLAGPDGVMRPTDGRDTATAVISALAALHGAWGVRVHDVRASVDAIKVVEAWMGAERIERDG |
3TZF Chain:B ((19-279)) | ------QVMGILNVTPDSFSDGGCHNNLDQALQHAQRMLSAGATLIDIGGESTRPG--EVSEQEELDRVVPVVEALAQRFDVWLSVDTSKAAVITESAHAGAHLINDIRSLQ-EPGALEAAAKTGLPVCLMHMQGQPKNMQHSPY-YDDLMTDINRFFQHHIERCVAAGIAKNKLLLDPGFGFGKNLAHNYQLLAHLSELHHFELPLLVGMSRKSMVGQLLN------VPPQQRVIGSVACAVIAAMQGAQIIRVHDVKETVEAMCIVEATRSAK------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TZF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123899 for 2205 contacts (-56.2/contact) +
2D Compatibility (PS) -29338 + (NN) -25756 + (LL) 776
1D Compatibility (HY) -20800 + (ID) 5200
Total energy: -204217.0 ( -92.62 by residue)
QMean score : 0.493
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