Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRDLPSLNALRAFEAAARLHSISLAAEELHVTHGAVSRQVRLLEDDLGVALFGKDGRGVKLTDSGVRLRDACGDAFERLRGVCAELRRQTAEAPFVLGVPGSLLARWFIPRLDQLNRALPDLRLQLSTSEGEFDPRRPGLDAMLWFAEPPWPADMQVFELAPERM-GPVVSPRLAQETGLAQAPAARLLQEPLLHTASRPQAWPAW-AASQGLAAEALRYGQ-GFEHLYY-LLEAAVA-GLGVAIAPEPL-VRDDLAAGRLAAPWGFIETDARLALWVPARLHDPRA-GRLAQWLREQLAG- |
| 3KOS Chain:A ((11-210)) | --------------------------------------------------------------------------------------------QEKLKIGVVGTFAIGCLFPLLSDFKRSYPHIDLHISTHNNRVDPAAEGLDYTIRYGGGAWHD--TDAQYLCSALMSPLCSPTLASQI----QTPADILKFPLLRS-YRRDEWALWMQTVGEAPPSPTH-NVMVFDSSVTMLEAAQAGMGVAIAP---VRMFTHLLSSERIVQPFLTQIDLGSYWITRLQSRPETPAMREFSRWLTGVLHKT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KOS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112734 for 1449 contacts (-77.8/contact) +
2D Compatibility (PS) -20362 + (NN) -6414 + (LL) 7528
1D Compatibility (HY) -10000 + (ID) 2050
Total energy: -144032.0 ( -99.40 by residue)
QMean score : 0.468
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