Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------MLWPATLIGAGAGWALASIPGALLGGLLGQLLDRRLRLESWRGLLARLRGRAVNDEDDLLFQLLGYLAKSGGRVEEMHIRQAREEMA--LRKLDRRAQRRA--IASFGKGKAGIAHLQAEVARL---KGERAEAVLLA-CWRMAWA------------GGVLSQSARQLVLQWGRWLGWS---AERTERLSARVM---PKRTRAVARDSYREALLLLGVEAGSEPALIKRAYRKLISQHHPDKLAGAGASVERVRAATEKTRELQAAYALVREREGFR-------------------------------------------------------------------------------------------------------------------- |
| 4D10 Chain:C ((3-403)) | SALEQFVNSVRQLSAQGQMTQLCELINKSGE--LLAKNLSHLDTVLGALDVQEHSLGVLAVLFVKFSMPSVPDFETLFSQVQLFISTCNGE----HIRYATDTFAGLCHQLTNALVERKQPLRGIGILKQAIDKMQMNTNQLTSIHADLCQLCLLAKCFKPALPYLDVDMMDICKENGAYDAKHFLCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILLGKVQQL-----PKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVNKHSETFTRDNNMGLVKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKDGMVSFHDNPEKYNNPAMLHNIDQEMLKCIELDERLKAMDQEITVNPQF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D10.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7284 for 1677 contacts (-4.3/contact) +
2D Compatibility (PS) -26015 + (NN) -16616 + (LL) 1512
1D Compatibility (HY) -15200 + (ID) 2300
Total energy: -65903.0 ( -39.30 by residue)
QMean score : 0.241
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