Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDNDDRIKLEASWKEALREEFDKPYMKQLGEFLRQEKAAGKVIFPPGPLIFNALNTTPLENVKVVIIGQDPYHGPGQAHGLCFSVQPGV-PTPPSLQNIYKELNRDLNIPIPNNGYLQRWAEQGVLLLNTSLTVEQAKAGSHANAGWQPFTDRVIEVVNERCERLVFLLWGSHAQSKQKLIDPQRHLILKSAHPSPLSAYRGFLGNGHFSRTNKFLEQNGKTPIDWSLPDL
4WPL Chain:A ((21-238))
---------VERGWAAALEPVADQ--VAHMGQFLRAEIAAGRRYLPAGSNVLRAF-TFPFDNVRVLIVGQDPYPTPGHAVGLSFSVAPDVRPWPRSLANIFDEYTADLGYPLPSNGDLTPWAQRGVLLLNRVLTVRPSNPASHRGKGWEAVTECAIRALAARAAPLVAILWGRDASTLKPMLAAGNCVAIESPHPSPLSASRGFFGSRPFSRANELLVGMGAEPIDWRLP--
General information:
TITO was launched using:
RESULT:
Template:
4WPL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100548 for 1799 contacts (-55.9/contact) +
2D Compatibility (PS) -23816 + (NN) -16706 + (LL) 292
1D Compatibility (HY) -19600 + (ID) 4950
Total energy: -165328.0 ( -91.90 by residue)
QMean score : 0.533
(partial model without unconserved sides chains):
PDB file :
Tito_4WPL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WPL-query.scw
PDB file :
Tito_Scwrl_4WPL.pdb
: