Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTSLPQAARSVRSSRSTTLTTTAVVLAGIAPLGNAAGFLEDSKASLETRNFYMNRDFRDGPGQSKREEWAQGFILNLQSGYTQGTVGFGLDAMGMLGV--KLDSGRGRSGTGLLPKDSDGRAPDTYSKLG-LTAKVKVSQSELKVGTLIPKLPSVQPNNGRIFPQIFEGALLTSKEIKDLGFTAGRLEKTKIRDSSDSEDLALNDKNGRFAGVSADHFDLGGLDYKLTDQLTASYHYSNLQDVYRQHFVGLLHSWPIGPGELTSDLRFARSTDSGSAKAGGIDNKSLNGMFTYSLGNHAFGAAWQRMNGDDAFPYLEGSNPYLVNFVQVNDFAGPKERSWQLRYDYDFVGLGIPGLTFMTRYVKGDNVELAGQSGEGREWERNTELQYVFQSGALKNLGIRWRNATFRSNFTRDIDENRLIVSYTLPIW |
| 3SZV Chain:A ((12-401)) | -------------------------------YFQGLEDLVEDSHASLELRNFYFNRDFR--------DEWAQGFLLRLESGFSEG--TVGFGVDAIGLLGFKLDS------------------QDDYAKLGLT-AKARVSNSLLKVGALHFKSPLVSANDTRLLPELFRGALLDVQEIDGLTLRGAHLDRNKLNSSSDYQVFSANRI-----GGRSDAFDFAGGDYRLTPALTASLHQGRLKDIYRQTFAGLVHTLDLG-RSLKSDLRFARASEDGG--FRELDNRAFGALFSLRLGAHAVAAGYQRISGDDPYPYIAGSDPYLVNFIQIGDFGNVDERSWQLRYDYDFGALGLPGLSFMSRYVSGDNVARGA-ANDGKEWERNTDLGYVVQSGPLKNLGVKWRNATVRSNFANDLDENRLILSYSLALW |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SZV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 15193 for 2792 contacts (5.4/contact) +
2D Compatibility (PS) -36668 + (NN) -2777 + (LL) 2496
1D Compatibility (HY) -37200 + (ID) 9400
Total energy: -68356.0 ( -24.48 by residue)
QMean score : 0.155
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