Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNMPSILSLAVAGLLVAPVHAATAPSEPFQPPAESSLPDNAFGEMVRQGQALFVETRKNAPHLVGNQLNCVNCHLDQGRRA---------------NSAP-QWAAYPVYPAFRAKNNKVNTFAERLQGCFQF--SMNG--------------KV----------PAADSPEIKALTVYAYWLASQA-PTGVSLPGRGYPDVAPPEGGYSIERGAKVYA-AQCAICHGADGQGQMA----------------------------LGQTVFPPLWGAQS---FNWGAGMHRINTAASFIKYNMPLGKPGTLSDRDAWDVAAFMNSHERPQDPRLVDGSVEKTRQKFHANDGVNLYGQKVNGVLLGQGI |
| 3O5C Chain:A ((22-295)) | ----------------------------------------TEPEKVELGKMLFFEPRL----SKSGFISCNSCHNLSTGGVDALPTSIGHHWQEGPINSPTVLNADF-MLAQFW-DGRASNLKEQAAGPIANPKEMGFTHELATETIASMPAYRARFAKVYGDEKVDIDRLTDAIAAFEKTLVTPNSPFDQYLLG------KQDAISGDAKAGYQLFKDKGCVSCHNGPAVGGTMFMKMGLIKPFHTNNPAEGRKGVTGKDADKFVFKVPTLRNIELTYPYFHDGSVWTLEEAVNTMADIQLG---QKLTEKETKEMVAFLNSLTGEQP------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3O5C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -44473 for 1476 contacts (-30.1/contact) +
2D Compatibility (PS) -20721 + (NN) -8561 + (LL) 3680
1D Compatibility (HY) 400 + (ID) 1750
Total energy: -71425.0 ( -48.39 by residue)
QMean score : 0.203
|
|
|