Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRVAPRDSAAQAASAVAESVRYQGRKASRQGSEQRRQAILDAAMRLIVRDGVRAVRHRAVAAEAQVPLSATTYYFKDIDDLITDTFALFVERNAEALSAFWSSVEGDLQEMAAVLADDPGARGSLVERIVELAVQYVQVQLTERREHLLAEQAFRQEALLNPRLRELADAHQRILSLGAVHFFQVLGSGQPEQDAKVLTSIILQMEYQGLVDGVEQLAVDEMRAILRRYLNLVMGL
3FRQ Chain:A ((6-179))
--------------------------------KLKSDDEVLEAATVVLKRCGPIEFTLSGVAKEVGLSRAALIQRFTNRDTLLVRMMERGVEQVRHYLNAIPI--------------------GAGPQGLWEFLQVLVRSMNT-RNDFSVNYLISWY-ELQVPELRTLAIQRNRAVVEGIRKRLP---PGAPAAAELLLHSVIAGATMQWAVDPDG-ELADHVLAQIAAILC-----
General information:
TITO was launched using:
RESULT:
Template:
3FRQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89313 for 1233 contacts (-72.4/contact) +
2D Compatibility (PS) -19198 + (NN) -12413 + (LL) 4668
1D Compatibility (HY) -2400 + (ID) 2000
Total energy: -120656.0 ( -97.86 by residue)
QMean score : 0.589
(partial model without unconserved sides chains):
PDB file :
Tito_3FRQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FRQ-query.scw
PDB file :
Tito_Scwrl_3FRQ.pdb
: