Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKKLLPLAVLAALSSVHVASAQAADVSAAVGATGQSGMTYRLGLSWDWDKSWWQTSTGRLTGYWDAGYTYWEGGDEGAGKHSLSFAPVF-VYEFAGDSIKPFIEAGIGVAAFSGTRVGDQNLGSSLNFE-DRIGAGLKFANGQSVGVRAIHYSNAGLKQPNDGIESYSLFYKIPI---------------------------------------------------------------------------------------------- |
| 3LGD Chain:A ((3-484)) | SIDETRAHLLLKEKMMRLGGRLVLNTKEELANERLMTLKIAEMKEAMRTLIFPPSMHFFQAKHLIERSQVFNILRMMPKGAALHLHDIGIVTMDWLVRNVTYRPHCHICFTPRGIMQFRFAHPTPRPSEKCSKWILLEDYRKRVQNVTEFDDSLLRNFTLVTQHPEVIYTNQNVVWSKFETIFFTISGLIHYAPVFRDYVFRSMQEFYEDNVLYMEIRARLLPVYELSGEHHDEEWSVKTYQEVAQKFVETHPEFIGIKIIYSDHRSKDVAVIAESIRMAMGLRIKFPTVVAG-------FDLVGHEDTGHSLHDYKEALMIPAKDGVKLPYFFHAGETDWQGTSI---DRNILDALMLNTTRIGHGFALSKH--------PAVRTYSWKKDIPIEVCPISNQVLKLVSDLRNHPVATLMATGHPMVISSDDPAMFGAKGLSYDFYEVFMGIGGMKADLRTLKQLAMNSIKYSTLLESEKNTFMEIWKKRWDKFIADVAT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LGD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2317 for 1117 contacts (-2.1/contact) +
2D Compatibility (PS) -15816 + (NN) -761 + (LL) 1160
1D Compatibility (HY) -2400 + (ID) 1000
Total energy: -21134.0 ( -18.92 by residue)
QMean score : 0.027
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