Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSSQDIHARSATTTPMPSVRNQEEVAKLIDVSKCIGCKACQVACSEWNELRDEVGHNHGTYDNPMDLTADSWTVMRFTEHENEAGNLEWLIRKDGCMHCAEPGCLKACPS---PGAIVKYANGIVDFNQDKC--IGCGYCITGCPFDIPRISQKDHKAYKCSLCSDRVSVGMEPACVKTCPTGAIVFGSKEDMKEHAAERIVDLKSRGYENAGLYDPEGVGGTHVMYVLHHADKPSLYAGLADQPSVSPLVSLWKGVTKPLALLAMGATVLAGFFHYVRVGPNRADDEEDHGQAEAPVHQVDPSVHTFDPHERR |
1H0H Chain:B ((2-209)) | ------------------------KGFFVDTTRCTACRGCQVACKQWHGNPATPTENTGFHQNPPDFNFHTYKLVRMHEQE-IDGRIDWLFFPDQCRHCIAPPCKATADMEDESAIIHDDATGCVLFTPKTKDLEDYESVISACPYDVPRKVAESNQMAKCDMCIDRITNGLRPACVTSCPTGAMNFGDLSEMEAMASARLAEIKA-AYSDAKLCDPDD---VRVIFLTA--HNPKLYH--------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1H0H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90949 for 1607 contacts (-56.6/contact) +
2D Compatibility (PS) -21551 + (NN) -10227 + (LL) 5440
1D Compatibility (HY) -12400 + (ID) 3350
Total energy: -133037.0 ( -82.79 by residue)
QMean score : 0.326
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