Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDKILSVEHLMMHFGG-IKAL-NDVNLDVERGSITALIGPNGAGKTTVFNCLTGFYKATGGNILLNTQGRTTDVIQVLGEPFQLDDFVKPPQLGSRLYYKMFGGTHLVNRAGLARTFQNIRLFKDMSVVENLLVAQHMFVNRNLLAGILNTPGYRRAESEALDHAFYWL--------EVVDLVDCANRLAGEMSYGQQRRLEIARAMCT-RPELICLDEPAAGLNPAETHALSNIVRYLRDHHGITVLLIEHDMGMVMNISDHIIVLDH-GDVIARGNPEQ----IRHDEKVIAAYLGADEEELS |
| 1G6H Chain:A ((4-257)) | -TMEILRTENIVKYFG-EFKALD-GVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFEN----KDITNK-------------------------EPAELYHYG-IVRTFQTPQPLKEMTVLENLLIGEICPGESPLNSLFYKKWIPKEEEMVEKAFKILEFLKLSHLYD----------RKAGELSGGQMKLVEIGRALMTN-PKMIVMDEPIAGVAPGLAHDIFNHVLELKAK-GITFLIIEHRLDIVLNYIDHLYVMF-NGQIIAEGRGEEEIKNVLSDPKVVEIYIGE------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186468 for 1903 contacts (-98.0/contact) +
2D Compatibility (PS) -25790 + (NN) -11737 + (LL) 2592
1D Compatibility (HY) -23600 + (ID) 4400
Total energy: -249403.0 ( -131.06 by residue)
QMean score : 0.417
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