Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEHIVNVTDASFEQDVLKADGPVLVDYWAEWCGPCKMIAPVLDEVARDYQGKLKVCKLNIDENQDTPPKYGVRGIPTLMLFKDGNVEATKVGALSKSQLAAFLDANI
1TXX Chain:A ((1-107))
-SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCVWCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL
General information:
TITO was launched using:
RESULT:
Template:
1TXX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68691 for 784 contacts (-87.6/contact) +
2D Compatibility (PS) -11410 + (NN) -1308 + (LL) 208
1D Compatibility (HY) -14800 + (ID) 3750
Total energy: -99751.0 ( -127.23 by residue)
QMean score : 0.733
(partial model without unconserved sides chains):
PDB file :
Tito_1TXX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TXX-query.scw
PDB file :
Tito_Scwrl_1TXX.pdb
: