Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKSKIYIDKIYWERVQLFVEGHSENLDLEDSNFVLRNLTETRTMKANDVKIDGNQFVCRFNVAILDNGYYLPEDKYLLVN-EQELD-----YIAQLNPD---VINDAYQNLKPEQEEEYNELETQNGKI--NFLLQTYLKEFRKGGISKKTVYTVTPEI----SSDVNEFVLDVVVTTPEVKSIYIVRKYKELRKYFRKQSFNTRQFIFKAIFNTT-KFFHLKKGNT-VLFTSDSRPTMSGN-FEYIYNEMLRQNLDKKYDIHTVFKANITDRRGIIDKFRL----PYLLGKADYIFVDDFHPLIYTVRFRRSQEVIQVWHAVGAFKTVGFSRTGKKGGPFIDSLNHRSYTKAYVSSETDIPFYAEAFGIKEKNVVPTGVPRTDVLFDEAYATQI--KQEMEDELPIIKGKKVILFAPTFRGSGHGTAHYPFFKIDFERLARYCEKNNAVVLFKMHPFVKNRLNIADKHKQYFVD--VSD-FREVNDILFITDLLI-SDYSSLIYEYAVFKKPMIFYAFDLEDYITTRDFYEPYESFVPGKIVQSFDALMDALDNEDYEGEKVIPFLDKHFKY-----QDGRSSERLVRNLFGS |
| 4XGC Chain:C ((1-676)) | -----MQPFYEEYRKAWNQINDHIADLQHRSYARTLEQLVDFVVGQAERDEV--------LPTAALLTGINQPDHLSQFTALTQRLHAQRAAMVCVLQSRDCATLKAAVETLVFGLVEDNAEVEQLRRSQCTMKQLKSWYTNNFDSEQKRRQLVVILPDFECFNASVLQDLILILSAHCGSLPFVLVLGVATAMTAVHGTLPYHVSSKIRLRVFQTQAAPTGLNEVLDKVLLSPKYAFHLSGKTFKFLTHIFLYYDFS-IHGFIQGFKYCLMEHFFGGNAFALCTDYSKALGRIKQLTHEDMETIRRLPSFRPYVEQIN-----DCKRIIAVLTDDDYLKKKLPQL-LRDCLLHFLLFRCSLEFLTELVGDLPR--CPLGKLRRE-LYVNCLNRAIISTPEYKECLQMLSFLSKDEFVAKVNRALERTEQFLVEEIAPLELGEACTAVLRPKLEAIRLAVDEVGRALQKTLQLIETQIVQDHLRALQDAPPIHELFVFSDIATVRRNIIGAPRAALHTALNNPHFPDLSVVYKLHLEC--GRMINLFD-WLQAFRSVVPQIQARFTRAVAELQFLGYIKMSKRKTDHATRLTW-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4XGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -102856 for 3819 contacts (-26.9/contact) +
2D Compatibility (PS) -54943 + (NN) 161 + (LL) 1784
1D Compatibility (HY) -14800 + (ID) 3950
Total energy: -174604.0 ( -45.72 by residue)
QMean score : 0.217
|
|
|