Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTHDYIVKALAFDGEIRAYAALTTETVQEAQTRHYTWPTASAAMGRTMTATAMMGAMLKGDQKLTVTVDGQGPIGRIIADANAKGEVRAYVDHPQTHFPLNEQGKLDVRRAVGTNGSIIVVKDVGMKDYFSGASPIVSGELGEDFTYYYATSEQTPSSVGLGVLVNPDNTIKAAGGFIIQVMPGAKDETISKLEKAISEMTPVSKLIEQGLTPEGLLNEILGEDHVQILEKMPVQFECNCSHEKFLNAIKGLGEAEIQNMIKEDHGAEAVCHFCGNKYKYTEEELNVLLESLA |
1G39 Chain:C ((1-29)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVSKLSQLQTEL--LAALLESGLSKEALIQA-------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G39.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3853 for 118 contacts (-32.7/contact) +
2D Compatibility (PS) -3230 + (NN) -1542 + (LL) 17132
1D Compatibility (HY) -3200 + (ID) 500
Total energy: 4807.0 ( 40.74 by residue)
QMean score : 0.598
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