Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNHIVLYQPEIPANTGNISRTCAGTDTYLHLIRPLGFSTDDKMLKRAGLDYWDNVKLSYYDSLDEFFEKNEGGEFYYITKFGRHVYSDIDYSDTNKDYFFVFGKETTGLPDALLQE-NEENCLRIPMTDHIRSLNLSNTAAILAYEALRQQNFGALLQEPNYDRKIFQD
1MXI Chain:A ((1-156))
ML-DIVLYEPEIPQNTGNIIRLCANTGFRLHLIEPLGFTWDDKRLRRSGLDYHEFAEIKRHKTFEAFLESEKPKRLFALTTKGCPAHSQVKFK---LGDYLMFGPETRGIPMSILNEMPMEQKIRIPMTANSRSMNLSNSVAVTVYEAWRQLGYKGAVNL----------
General information:
TITO was launched using:
RESULT:
Template:
1MXI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91542 for 1148 contacts (-79.7/contact) +
2D Compatibility (PS) -16829 + (NN) -6984 + (LL) 156
1D Compatibility (HY) -10800 + (ID) 3300
Total energy: -129299.0 ( -112.63 by residue)
QMean score : 0.472
(partial model without unconserved sides chains):
PDB file :
Tito_1MXI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MXI-query.scw
PDB file :
Tito_Scwrl_1MXI.pdb
: