Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKIYDTMTRSLQDFIPLNEGKVNMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEYCGYQVNYISNFTDVDDKIIKGAAEA---G-------------------------------------------MDTKSFSDKFISAFMEDVAALGVKPATKNPRVIDYMDEIIDFVKVLVDKEFAYEANGDVYFRVSKSHHYAKLANKTLEDLEIGASGRVDGEGEIKENPLDFALWKSAKSGEVSWESPWGKGRPGWHIECSVMATEI-LGDTIDIHGGGADLEFPHHTNEIAQSEAKTGKT--FANYWMHNGFVNV-DN--EKMSKSLGNFITVHDMLKSVDGQVIRFFLATQQYRKPVNFTEKAVHDAE--VNLKYLKNTFNLPIQENA-----------------------NDEELEQFVKAFQEAMDDDFNTANGITVIFEMAKWINSGHYT----------------SKVKETLAELLEIFGIVFQEEVLDADIESLIEQRQEARANRDFATADRIRDELAKQGIKLLDTKDGVRWTRD |
| 3FNR Chain:A ((27-450)) | -----------------KKQESFLLEYVSANPTGPLHIGHARGAVFGDTLTRLARHLGYKFNTEYYVNDAGNQIYLLGLSILLSVKESILHENVEYPEQYYKGEYIVDLAKEAFEKFGKEFFSEENIPSLADWAKDKMLVLIKQNLEQAKIKID-SYVSERSYYDALNATLESLKEHKGIYEQEGKIWLASSQK---GDE----------K--DRV----IIRED------------GRGTYLAA----------DIVYHKDKMSRGYGKCINIWGADHHGYI-PRMKAAME-FLGFDSNNLEIILAQMVSLLKDGEPYKM---AGNFILMSDVVDEIGSDALRYIFLSKKCDTHLEFDISDLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADLQSLNQDGVNLLFEALNLKAVLNDAF-EARALQKIPDYLKNLAANFHKFYNENKVVGSANENDLLKLFSLVALSIKTAFSLMGIEAKNKM-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FNR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131640 for 2570 contacts (-51.2/contact) +
2D Compatibility (PS) -34311 + (NN) -5980 + (LL) 7460
1D Compatibility (HY) -8800 + (ID) 2850
Total energy: -176121.0 ( -68.53 by residue)
QMean score : 0.414
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