Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------------------------------MTISNQELTLTPLRGKSGKAYIGTY---------PNGERVFVKYNTTPILPALAKEQIAPQLLWARRTSNGDMMSA------QEWLDGRTLTKEDM----GSKQIIHILLRLHKSR-PLVNQLLQLGYKIENPYDLLMD-WEKQTPIQIRENTYLQSI-VTELKRSLPEFRTEVA------TIVHGDIKHSNWVITTSGLIYLVDWDSVRLTDRMYDVAYILSHYIPQKHWKDWLSYYGYKDNEKVWSKIIWYGQFSYLSQIIKCFDKRDMEHVNQEIYELRKFRELIKKHNAS-------------------------------------------- |
1NW1 Chain:A ((32-426)) | GMKELLSTMDLDTDANTIPELKERAHMLCARFLGGAWKTVPLEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTLLSERHLGPKLYGIFSGGRLEEYIPSRPLSCHEISLAHMSTKIAKRVAKVHQLEVPIWKEPDYLCEALQRWLKQLTGTVDAEHRFDLPEECGVSSVNCLDLARELEFLRAHISLSKSPVTFCHNDLQEGNILLPKR--LVLIDFEYASYNYRAFDFANHFIEWT--------IDYDIDEAPFYKIQTENFPENDQMLEFFLNYLREQGNTRENELYKKSEDLVQETLPFVPVSHFFWGVWGLLQVELSPVGFGFADYGRDRLSLYFKHKQLLKNLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NW1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72726 for 1759 contacts (-41.3/contact) +
2D Compatibility (PS) -27504 + (NN) -7860 + (LL) 392
1D Compatibility (HY) -12400 + (ID) 1700
Total energy: -121798.0 ( -69.24 by residue)
QMean score : 0.306
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