Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKLVATDMDGTFLDENGTYDKKRLANVLKKFKEQGIVFTAASGRSLLSLEQLFAD-FRDQMAFIAENGSAAVLFN-RLAYEQHLSREQYLDIIDHLSKSPYMENNEYVLSGKDGAYILSDANPDYIEFITHYYD----NLQKVSHFEDVD--DIIFKVTANFTEETVRQAEEWVNQAIP-YTTAVTTGFKSIDIILSSVNKRNGLEHLCEQYGIRAEEVLSFGDNINDLEMLEWSGKAIATENARPEVKEIADCIIGHHNNQAVMAYLESMVD |
| 1NF2 Chain:A ((1-262)) | MYRVFVFDLDGTLLNDNLEISEKD-RRNIEKLSR-KCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEEGVILNEKIPPEVAKDIIEYIKPL----NVHWQAYIDDVLYSEKDNEE--I---KSYARHSNVDYRVEPNLSELVSKMGTTKLLLIDTPERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLERIST |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NF2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127730 for 2107 contacts (-60.6/contact) +
2D Compatibility (PS) -26904 + (NN) -5593 + (LL) 1016
1D Compatibility (HY) -14800 + (ID) 3250
Total energy: -177261.0 ( -84.13 by residue)
QMean score : 0.519
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