Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLIGIVGTNSNK-STNRQLLQYMQQHFAD---KAEIELIEVKDLPL-FNKPAD---------KNV-P---QVILDIAAKIEEADGVIIGTPEYDHSIPSALMSVLAWLSYGI-----------YPLLNKPVMITGASYGTLGS---SRAQLQLRQILNAPELKASVLPDEFLLSHSLQAFDKDGNLHDIETSQKLDAIFDDFRLFVKITGKLSNARDLLQKEAENFDWESL
1T5B Chain:A ((2-171))
SKVLVLKSSILAGYSQSGQLTDYFIEQWREKHVADEITVRDLAANPVPVLDGELVGAMRDAPLTPRQQDALALSDELIAELKAHDVIVIAAPMYNFNIPTQLKNYFDLIARAGITFRYTEKGPEGLVTGKRAVVLSSRGGIHKDTPTDLIAPYLKVFLGF--IGITDVNFVFAEGIAYGPEVAAKAQADAKAAIDSVVAA--------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1T5B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79393 for 976 contacts (-81.3/contact) +
2D Compatibility (PS) -15121 + (NN) -8972 + (LL) 1860
1D Compatibility (HY) -6000 + (ID) 1000
Total energy: -108626.0 ( -111.30 by residue)
QMean score : 0.662
(partial model without unconserved sides chains):
PDB file :
Tito_1T5B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T5B-query.scw
PDB file :
Tito_Scwrl_1T5B.pdb
: