Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------MGRKWANIVAKKTAK--------------DGANSKVYAKFGV----------EIYVAAKQGEPDPESNSALKFVLDRAK----QAQVPKHVIDKAIDKAKGN--------TDETFVEGRYEGFGPNGSMIIVDTLTSNVNRTAANVRTAYGKNGGNMGASGSVSYLFDKKGVIVFAGDDADTVFEQLLEADVDVDDVEAEEGTITVY-TAPTDLHKGIQALRDNGVEEFQVTEL-----EMIPQSEVVLEGDDLETF------EKLIDALESDDDVQKVYHNVADF------------------------------------------ |
| 1HH2 Chain:P ((1-344)) | MNIGLLEALDQLEEEKGISKEEVIPILEKALVSAYRKNFGNSKNVEVVIDRNTGNIKVYQLLEVVEEVEDPATQISLEEAKKIDPLAEVGSIVKKELNVKNFGRIAAQTAKQVLIQRIRELEKEKQFEKYSELKGTVTTAEVIRV--MGEWADIRIGKLETRLPKKEWIPGEEIKAGDLVKVYIIDVVKTTKGPKILVSRRVPEFVIGLMKLEI----PEVENGIVEIKAIAREPGVRTKVAVASNDPNVDPIGACIGEGGSRIAAILKELKGEKLDVLKWSDDPKQLIANALAPATVIEVEILDKENKAARVLVPPTQLSLAIGKGGQNARLAAKLTGWKIDIKPIMNL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HH2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4635 for 1479 contacts (3.1/contact) +
2D Compatibility (PS) -24532 + (NN) -9500 + (LL) -348
1D Compatibility (HY) -6000 + (ID) 1900
Total energy: -37645.0 ( -25.45 by residue)
QMean score : 0.280
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