Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQIDSIDFQILQLLNKNARIQWKEIGEKIHMTGQAVGNRIKKMEDNGIIKAYSIVVDELKMGFSFTAFVFFFMN-AYMHDDLLKFIATRNEISEAHRVSGDACYLLKVTV-HSQEVLNHLLN-DLLKYG---NYQLYLSIKEVKKHYNTSLMSDE
2DBB Chain:A ((6-149))-KLDRVDMQLVKILSENSRLTYRELADILNTTRQRIARRIDKLKKLGIIRKFTIIPDIDKLGYM-YAIVLIKSKVPSDADKVISEISDIEYVKSVEKGVGRYNIIVRLLLPKDIKDAENLISEFLQRIKNAENVEVILISEVRKFE---------


General information:
TITO was launched using:
RESULT:

Template: 2DBB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 430 -98904 -230.01 -716.69
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -230.01
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.484

(partial model without unconserved sides chains):
PDB file : Tito_2DBB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2DBB-query.scw
PDB file : Tito_Scwrl_2DBB.pdb: