Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-MNKYEIIANEMRNRIKNNVYPIDQPI-PDEVSLAKEFNSSRMTMKRALDNLVAEGLLFRKRGHGTFIIQSAIQDDHVHVVSNEILGLTNL-LKD-KKIKSKVIQFEVQFPTEEVAAHLSI-DQKTPVYYVVRLRIVEGEPYVLEKTYMPTHLIPGINDDVLHDSIYNHITNVLQLKIAGTHRKIRACKSDHIDQQHL-GCKQDDPILEVEHVGFLDTGI-PFEYSFSRHRHDKFVVTSVNIRR
3EDP Chain:A ((7-236))KKPLFEVIASKIKDSINRDEY---KTGMPNETALQEIYSSSRTTIRRAVDLLVEEGLVVRKNGVGLYVQPKLTAQNILE------------MTGVMKNLKKDIKDFYIRKAGKFYAEIF-GMKENELVYSIKFVQKSE-HGATLDRLILPLGLYPDLQAKDFQIINIIELVNSGKYKLFELEQELQLILAG-NEQIKNMHLNENDPVFKLSSVFYAE-NDMPIAIQYHYEDAESTKYVVDFN--


General information:
TITO was launched using:
RESULT:

Template: 3EDP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 960 -62119 -64.71 -287.59
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -64.71
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.485

(partial model without unconserved sides chains):
PDB file : Tito_3EDP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3EDP-query.scw
PDB file : Tito_Scwrl_3EDP.pdb: