Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPKPADHRNHAAVSTSVLSALFLGAGAALLSACSSPQHASTVPGTTPSIWTGSPAPSGLSGHDEESPGAQSLTSTLTAPDGTKVATAKFEFAN-GYATVTIATTGVGKLTPG-FHGLHIHQVGKCEPNSVAPTGGAPGNFLSAGGHYHVPGHTG------TPASGDLASLQVRGDGSAMLVTTTDAFTMD--DLLSG---AKTAIIIHAGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIGSG |
1XTM Chain:B ((19-170)) | --------------------------------------------------------------------AFGHHVQLVNREGKAVGFIEIKESDDEGLDIHISAN---SLRPGASLGFHIHEKGSCVR----------PDFESAGGHFNPLNKEHGFNNPMGHHAGDLPNLEVGADGKVDVIMNAPDTSLKKGSKLNILDEDGSAFIIHEQADDYLTNPS-------------------GNSGARIVCGALLG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XTM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68086 for 1112 contacts (-61.2/contact) +
2D Compatibility (PS) -15738 + (NN) -12602 + (LL) 1900
1D Compatibility (HY) -5200 + (ID) 2000
Total energy: -101726.0 ( -91.48 by residue)
QMean score : 0.495
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