Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------MAPASTSST----GGHALATLLGNHGVEVVVADSIADVEAAARPDSLLLVAQTQYLVDNALLDRLAKAPGDLLLVAPTSRTRTALTPQLRIAAASPFNSQPNCTLREANRAGSVQWGPSDTYQATGDLVLTSCYGGALVRFRAEGRTITVVGSSNFMTNGGLLPAGNAALAMN-LAGNRPRLVWYAPDHIEGEMSSPSSLSDLIPENVHWTIWQL-----WLVVLLVALWKGRRIGPLVAEELPVVIRASETVEGRGRLYRSRRARDRAADALRTATLQRLRPRLGVGAGAPAPAVVTTIAQRSKADPPFVAYHLFGPAPATDNDLLQLARALDDIERQVTHS----- |
3EB8 Chain:A ((53-399)) | AEKHSEKKLMDSFSPSLSQDKMDGEFAHANIDGISIRLCLNKGICSVFYLDGDK-----IQSTQLSSKEYNNLLSSLPPKQFNLGKVHTITAPVSGNFK-------THKPAPEVIETAINCCTSIIPNDDYFHVKDTDFNSVWHDIYRDIRASDSNSTKIYFNNIEIPLKLIADLINELGINEFIDSKKELQMLSYNQVNKIINSNFPQQDLCFQTEKLLFTSLFQDPAFISALTSAFWQSLHITSSSVEHIYAQI-MSENIENRLNFMPEQRVINNCG---HIIKINAVRA-----YEVSSSILPSHITCNGVGINKIETSYLV--HAGTLPSSEGLRNAIPPESRQVSFAIISPD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EB8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67295 for 2402 contacts (-28.0/contact) +
2D Compatibility (PS) -33042 + (NN) -6482 + (LL) 1448
1D Compatibility (HY) -11200 + (ID) 2450
Total energy: -119021.0 ( -49.55 by residue)
QMean score : 0.108
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