Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIPRLPPLNAVRAFEAAARLGSYVAAAKALHVTQPAVGRHVRLLEDWLGARLFERTSRGVLLTPAGRQYYAAVSTALQ-QIAEA---GGQLSGARWLRIMAVPAFSRRWLTSRLETLCAQRPGLKIALEP---NPTFDHVEERSADLGIVYGLPGQYANPRALL-IRPKVFPVCSPAYLAAAGPLESAEQLVAHK-LIHVDDGEWWNLWFSAIGVDVEVRPAVLYLSNDHA-LAR-AEEGLGIALANEVLVRQELRSGA-LV-RPLAAEA-ALECYQVLTPPGTPSADVEWFIGWLGEALREEFPDAVTS |
| 3FZV Chain:A ((4-300)) | ------YTLRQLKYFVTTVECGSVAEASRKLYIAQS-ISTAVKGLEESFV---------QLFLTPAGARFYRKAQELLRMAHEFEQNLADNDVIAGQIDIGCFETVAPLYLPGLIAGFRQAYPGVEIRIRDGEQQELVQGLTSGRFDLAFLYEHDLDSTIETEPLMPPQRPHALLPEGHRFAGQAQVSLRDLCLEPMILLDVQP--SRTYFVSLFEELGLTPNIAFSSPSIEMVRGMVGQGFGFSLLVTRPHSECTYDGKKVVMVDLAEPVSTSGLAAAWLKRAQLTKPARLFVDYCREQLGK-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FZV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166562 for 1984 contacts (-84.0/contact) +
2D Compatibility (PS) -28735 + (NN) -3810 + (LL) 2184
1D Compatibility (HY) -12400 + (ID) 2150
Total energy: -211473.0 ( -106.59 by residue)
QMean score : 0.339
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