Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEPTILLLLALLVGFLLLLVRGHPKSRGNFPPGPRPLPLLGNLLQLDRGGL--LNSFMQLREKYGDVFTVHL-GPRPVVMLCGTDTIKEALVGQAEDFSG---RGTIAVIEPIFKEYGVIFA---NGERWKALRRFSLATMRDFGMGKRSVEERIQEEAQCLVEELRKSQGAPLDPTFLFQC---ITANIICSIVFGERFDYTDRQFLRLLELFYRTFSLLSSFSSQVFEFFSGFLKYFPGAHRQISKNLQEILDYIGHIVEKHRATLDPSAPRDFIDTYLLRMEKEKSNHHTEFHHENLMISLLSLFFAGTETSSTTLRYGFLLMLKYPHVAEKVQKEIDQVIGSHRLPTLDDRSKMPYTDAVIHEIQRFSDLVPIGVPHRVTKDTMFRG-YLLPKNTEVYPILSSALHDPQYF-DHPDSFNPEHFLDANGALKKSEAFMPFSTGKRICLGEGIARNELFLFFTTILQNFSVSSHLAPKDIDLTPKESG--IGKIPPTYQICFSAR-- |
1DT6 Chain:A ((12-471)) | -------------------------PPGPTPFPI-IGNI---LQIDA-K--DISKSLTKFSECYGPVFTVYLG-MKPTVVLHGYEAVKEALVDLGEEFAGRGS----VPILEKVSKGLGIAFSNA--KTWKEMRRFSLMTLRNFGMGKRSIEDRIQEEARCLVEELRKTN-A-SPCDPTF-ILGCAPCNVICSVIFHNRFDY-KDEEFLKLMESLHENVELLGTPL----------DYFPGIHKTLLKNADYIKNFIMEKVKEHQKLLD-VNNPRDFIDCFLIKMEQENN--LEFTLESLVIAVSDLFGAGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHRSPCMQDRSRMPYTDAVIHEIQRFIDLLPTNLPHAVTRDVRFR-NYFIPKGTDIITSLTSVLHDEKAFP-NPKVFDPGHFLDESGNFKKSDYFMPFSAGKRMCVGEGLARMELFLFLTSILQNF-KLQSLVEPKDLDITAVVNGFVSVPPS-YQLCFIPIHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DT6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -251200 for 3495 contacts (-71.9/contact) +
2D Compatibility (PS) -46254 + (NN) -24292 + (LL) 2964
1D Compatibility (HY) -32400 + (ID) 9950
Total energy: -361132.0 ( -103.33 by residue)
QMean score : 0.459
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